List of Publications 2015

Adams MJ, Lefkowitz EJ, King AM, Bamford DH, Breitbart M, Davison AJ, Ghabrial SA, Gorbalenya AE, Knowles NJ, Krell P, Lavigne R, Prangishvili D, Sanfaçon H, Siddell SG, Simmonds P, Carstens EB. - Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2015). Arch Virol. 2015 Jul;160(7):1837-50.

Al-Hamidhi S, H Tageldin M, Weir W, Al-Fahdi A, Johnson EH, Bobade P, Alqamashoui B, Beja-Pereira A, Thompson J, Kinnaird J, Shiels B, Tait A, Babiker H - Genetic Diversity and Population Structure of Theileria annulata in Oman. PLoS One. 2015 Oct 15;10(10):e0139581. file

Allen JE, Sutherland TE, Rückerl D - IL-17 and neutrophils: unexpected players in the type 2 immune response. Curr Opin Immunol. 2015 Mar 17;34:99-106. file

Anastasi E, Giguère S, Berghaus LJ, Hondalus MK, Willingham-Lane JM, MacArthur I, Cohen ND, Roberts MC, Vazquez-Boland JA - Novel transferable erm(46) determinant responsible for emerging macrolide resistance in Rhodococcus equi. J Antimicrob Chemother. 2015 Dec;70(12):3184-90. file

Anh PH, Van Cuong N, Son NT, Tue NT, Kosoy M, Woolhouse ME, Baker S, Bryant JE, Thwaites G, Carrique-Mas JJ, Rabaa MA. - Diversity of Bartonella spp. in Bats, Southern Vietnam. Emerg Infect Dis. 2015 Jul;21(7):1266-7. file

Anderton SM - Peptide immunotherapy in experimental autoimmune encephalomyelitis. Biomed J. 2015 May-Jun;38(3):206-14. file

Anderton SM, Fillatreau S - Editorial overview: Immunomodulation: New insights for future treatments. Curr Opin Pharmacol. 2015 Aug;23:vii-ix. file

Appleby LJ, Nausch N, Heard F, Erskine L, Bourke CD, Midzi N, Mduluza T, Allen JE, Mutapi F - Down Regulation of the TCR Complex CD3?-Chain on CD3+ T Cells: A Potential Mechanism for Helminth-Mediated Immune Modulation. Front Immunol. 2015 Feb 18;6:51. file

Arthur C, Watt K, Nussey DH, Pemberton JM, Pilkington JG, Herman JS, Timmons ZL, Clements DN, Scott PR - Osteoarthritis of the temporo-mandibular joint in free-living Soay sheep on St Kilda. Vet J. 2015 Jan;203(1):120-5. file

Bahbahani H, Clifford H, Wragg D, Mbole-Kariuki MN, Van Tassell C, Sonstegard T, Woolhouse M, Hanotte O - Signatures of positive selection in East African Shorthorn Zebu: A genome-wide single nucleotide polymorphism analysis. Sci Rep. 2015 Jul 1;5:11729. file

Barros-Álvarez X, Cáceres AJ, Ruiz MT, Michels PA, Concepción JL, Quiñones W. - The glycosomal-membrane associated phosphoglycerate kinase isoenzyme A plays a role in sustaining the glucose flux in Trypanosoma cruzi epimastigotes. Mol Biochem Parasitol. 2015 Mar-Apr;200(1-2):5-8. file

Baylay AJ, Ivens A, Piddock LJ. - A Novel Gene Amplification Causes Up-regulation of the PatAB ABC Transporter and Fluoroquinolone Resistance in Streptococcus pneumoniae. Antimicrob Agents Chemother. 2015 Jun;59(6):3098-108. file

Bedford T, Riley S, Barr IG, Broor S, Chadha M, Cox NJ, Daniels RS, Gunasekaran CP, Hurt AC, Kelso A, Klimov A, Lewis NS, Li X, McCauley JW, Odagiri T, Potdar V, Rambaut A, Shu Y, Skepner E, Smith DJ, Suchard MA, Tashiro M, Wang D, Xu X, Lemey P, Russell CA. - Global circulation patterns of seasonal influenza viruses vary with antigenic drift. Nature. 2015 Jul 9;523(7559):217-20. file

Bénézech C, Luu NT, Walker JA, Kruglov AA, Loo Y, Nakamura K, Zhang Y, Nayar S, Jones LH, Flores-Langarica A, McIntosh A, Marshall J, Barone F, Besra G, Miles K, Allen JE, Gray M, Kollias G, Cunningham AF, Withers DR, Toellner KM, Jones ND, Veldhoen M, Nedospasov SA, McKenzie AN, Caamaño JH. - Inflammation-induced formation of fat-associated lymphoid clusters. Nat Immunol. 2015 Aug;16(8):819-28. file

Besusso D, Saul L, Leech MD, O'Connor RA, MacDonald AS, Anderton SM, Mellanby RJ. - 1,25-Dihydroxyvitamin D3-Conditioned CD11c+ Dendritic Cells are Effective Initiators of CNS Autoimmune Disease. Front Immunol. 2015 Nov 18;6:575. file

Blaxter M, Koutsovoulos G. - The evolution of parasitism in Nematoda. Parasitology. 2015 Feb;142 Suppl 1:S26-39 file

Boros Á, Pankovics P, Simmonds P, Pollák E, Mátics R, Phan TG, Delwart E, Reuter G. - Genome analysis of a novel, highly divergent picornavirus from common kestrel (Falco tinnunculus): The first non-enteroviral picornavirus with type-I-like IRES. Infect Genet Evol. 2015 Apr 9;32:425-431. file

Brennand A, Rico E, Rigden DJ, Van Der Smissen P, Courtoy PJ, Michels PA - ATG24 Represses Autophagy and Differentiation and Is Essential for Homeostasy of the Flagellar Pocket in Trypanosoma brucei. PLoS One. 2015 Jun 19;10(6):e0130365. file

Buck AH, Ivens A, Gordon K, Craig N, Houzelle A, Roche A, Turnbull N, Beard PM. - Quantitative Analysis of MicroRNAs in Vaccinia virus Infection Reveals Diversity in Their Susceptibility to Modification and Suppression. PLoS One. 2015 Jul 10;10(7):e0131787. file

Bühlmann M, Walrad P, Rico E, Ivens A, Capewell P, Naguleswaran A, Roditi I, Matthews KR - NMD3 regulates both mRNA and rRNA nuclear export in African trypanosomes via an XPOI-linked pathway. Nucleic Acids Res 2015 May 19;43(9):4491-504. file

Carrique-Mas JJ, Tue NT, Bryant JE, Saylors K, Cuong NV, Hoa NT, An NN, Hien VB, Lao PV, Tu NC, Chuyen NK, Chuc NT, Tan DV, Duong HV, Toan TK, Chi NT, Campbell J, Rabaa MA, Nadjm B, Woolhouse M, Wertheim H, Thwaites G, Baker S - The baseline characteristics and interim analyses of the high-risk sentinel cohort of the Vietnam Initiative on Zoonotic InfectiONS (VIZIONS). Sci Rep. 2015 Dec 10;5:17965. file

Carroll MW, Matthews DA, Hiscox JA, Elmore MJ, Pollakis G, Rambaut A, Hewson R, García-Dorival I, Bore JA, Koundouno R, Abdellati S, Afrough B, Aiyepada J, Akhilomen P, Asogun D, Atkinson B, Badusche M, Bah A, Bate S, Baumann J, Becker D, Becker-Ziaja B, Bocquin A, Borremans B, Bosworth A, Boettcher JP, Cannas A, Carletti F, Castilletti C, Clark S, Colavita F, Diederich S, Donatus A, Duraffour S, Ehichioya D, Ellerbrok H, Fenandez-Garcia MD, Fizet A, Fleischmann E, Gryseels S, Hermelink A, Hinzmann J, Hopf-Guevara U, Ighodalo Y, Jameson L, Kelterbaum A, Kis Z, Kloth S, Kohl C, Korva M, Kraus A, Kuisma E, Kurth A, Liedigk B, Logue CH, Lüdtke A, Maes P, McCowen J, Mély S, Mertens M, Meschi S, Meyer B, Michel J, Molkenthin P, Muñoz-Fontela C, Muth D, Newman EN, Ngabo D, Oestereich L, Okosun J, Olokor T, Omiunu R, Omomoh E, Pallasch E, Pályi B, Portmann J, Pottage T, Pratt C, Priesnitz S, Quartu S, Rappe J, Repits J, Richter M, Rudolf M, Sachse A, Schmidt KM, Schudt G, Strecker T, Thom R, Thomas S, Tobin E, Tolley H, Trautner J, Vermoesen T, Vitoriano I, Wagner M, Wolff S, Yue C, Capobianchi MR, Kretschmer B, Hall Y, Kenny JG, Rickett NY, Dudas G, Coltart CE, Kerber R, Steer D, Wright C, Senyah F, Keita S, Drury P, Diallo B, de Clerck H, Van Herp M, Sprecher A, Traore A, Diakite M, Konde MK, Koivogui L, Magassouba N, Avšic-Županc T, Nitsche A, Strasser M, Ippolito G, Becker S, Stoecker K, Gabriel M, Raoul H, Di Caro A, Wölfel R, Formenty P, Günther S. - Temporal and spatial analysis of the 2014-2015 Ebola virus outbreak in West Africa. Nature. 2015 Aug 6;524(7563):97-101. file

Chung The H, Karkey A, Pham Thanh D, Boinett CJ, Cain AK, Ellington M, Baker KS, Dongol S, Thompson C, Harris SR, Jombart T, Le Thi Phuong T, Tran Do Hoang N, Ha Thanh T, Shretha S, Joshi S, Basnyat B, Thwaites G, Thomson NR, Rabaa MA, Baker S - A high-resolution genomic analysis of multidrug-resistant hospital outbreaks of Klebsiella pneumoniae. EMBO Mol Med. 2015 Feb 20;7(3):227-39. file

Cherif MK, Sanou GS, Bougouma EC, Diarra A, Ouédraogo A, Dolo A, Troye-Blomberg M, Cavanagh DR, Theisen M, Modiano D, Sirima SB, Nebié I. - Is Fc gamma receptor IIA (Fc?RIIA) polymorphism associated with clinical malaria and Plasmodium falciparum specific antibody levels in children from Burkina Faso? Acta Trop. 2015 Feb;142:41-6. file

Christensen LL, Selman C, Blount JD, Pilkington JG, Watt KA, Pemberton JM, Reid JM, Nussey DH - Plasma markers of oxidative stress are uncorrelated in a wild mammal. Ecol Evol. 2015 Oct 19;5(21):5096-5108. file

Coakley G, Maizels RM, Buck AH - Exosomes and Other Extracellular Vesicles: The New Communicators in Parasite Infections. Trends Parasitol. 2015 Oct;31(10):477-89. file

Colbeck EJ, Hindley JP, Smart K, Jones E, Bloom A, Bridgeman H, McPherson RC, Turner DG, Ladell K, Price DA, O'Connor RA, Anderton SM, Godkin AJ, Gallimore AM - Eliminating roles for T-bet and IL-2 but revealing superior activation and proliferation as mechanisms underpinning dominance of regulatory T cells in tumors. Oncotarget. 2015 Sep 22;6(28):24649-59. file

Comandatore F, Cordaux R, Bandi C, Blaxter M, Darby A, Makepeace BL, Montagna M, Sassera D.- Supergroup C Wolbachia, mutualist symbionts of filarial nematodes, have a distinct genome structure. Open Biol. 2015 Dec;5(12). pii: 150099. file

Cook PC, Owen H, Deaton AM, Borger JG, Brown SL, Clouaire T, Jones GR, Jones LH, Lundie RJ, Marley AK, Morrison VL, Phythian-Adams AT, Wachter E, Webb LM, Sutherland TE, Thomas GD, Grainger JR, Selfridge J, McKenzie AN, Allen JE, Fagerholm SC, Maizels RM, Ivens AC, Bird A, MacDonald AS - A dominant role for the methyl-CpG-binding protein Mbd2 in controlling Th2 induction by dendritic cells. Nat Commun. 2015 Apr 24;6:6920. file

Coomes SM, Pelly VS, Kannan Y, Okoye IS, Czieso S, Entwistle LJ, Perez-Lloret J, Nikolov N, Potocnik AJ, Biró J, Langhorne J, Wilson MS. - IFNγ and IL-12 Restrict Th2 Responses during Helminth/Plasmodium Co-Infection and Promote IFNγ from Th2 Cells. PLoS Pathog. 2015 Jul 6;11(7):e1004994. file

Cornforth DM, Matthews A, Brown SP, Raymond B. - Bacterial Cooperation Causes Systematic Errors in Pathogen Risk Assessment due to the Failure of the Independent Action Hypothesis. PLoS Pathog. 2015 Apr 24;11(4):e1004775. file

Cowley LA, Beckett SJ, Chase-Topping M, Perry N, Dallman TJ, Gally DL, Jenkins C. - Analysis of whole genome sequencing for the Escherichia coli O157:H7 typing phages. BMC Genomics. 2015 Apr 8;16(1):271. file

D'arc M, Ayouba A, Esteban A, Learn GH, Boué V, Liegeois F, Etienne L, Tagg N, Leendertz FH, Boesch C, Madinda NF, Robbins MM, Gray M, Cournil A, Ooms M, Letko M, Simon VA, Sharp PM, Hahn BH, Delaporte E, Mpoudi Ngole E, Peeters M - Origin of the HIV-1 group O epidemic in western lowland gorillas. Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):E1343-52. file

Díaz Á, Fernández C, Pittini Á, Seoane P, Allen JE, Casaravilla C - The laminated layer: recent advances and insights into echinococcus biology and evolution. Exp Parasitol. 2015 Nov;158:23-30 file

Domingo-Sananes MR, Szöor B, Ferguson MA, Urbaniak MD, Matthews KR - Molecular control of irreversible bistability during trypanosome developmental commitment. J Cell Biol. 2015 Oct 26;211(2):455-68. file

Drosten C, Muth D, Corman V, Hussain R, Al Masri M, HajOmar W, Landt O, Assiri A, Eckerle I, Al Shangiti A, Al-Tawfiq JA, Albarrak A, Zumla A, Rambaut A, Memish Z - An observational, laboratory-based study of outbreaks of MERS-Coronavirus in Jeddah and Riyadh, Kingdom of Saudi Arabia, 2014. Clin Infect Dis. 2015 Feb 1;60(3):369-77. file

Dudas G, Bedford T, Lycett S, Rambaut A - Reassortment between Influenza B Lineages and the Emergence of a Coadapted PB1-PB2-HA Gene Complex. Mol Biol Evol. 2015 Jan;32(1):162-72. file

Dudas G, Obbard DJ - Are arthropods at the heart of virus evolution? Elife. 2015 Mar 9;4. file

Estrela S, Whiteley M, Brown SP - The demographic determinants of human microbiome health. Trends Microbiol. 2015 Mar;23(3):134-41. file

Eves-van den Akker S, Lilley CJ, Reid A, Pickup J, Anderson E, Cock PJ, Blaxter M, Urwin PE, Jones JT, Blok VC. - A metagenetic approach to determine the diversity and distribution of cyst nematodes at the level of the country, the field and the individual. Mol Ecol. 2015 Dec;24(23):5842-5851. file

Fairlie-Clarke KJ, Hansen C, Allen JE, Graham AL. - Increased exposure to Plasmodium chabaudi antigens sustains cross-reactivity and avidity of antibodies binding Nippostrongylus brasiliensis: dissecting cross-phylum cross-reactivity in a rodent model. Parasitology. 2015 Dec;142(14):1703-14. file

Farnell EJ, Tyagi N, Ryan S, Chalmers IW, Pinot de Moira A, Jones FM, Wawrzyniak J, Fitzsimmons CM, Tukahebwa EM, Furnham N, Maizels RM, Dunne DW - Known Allergen Structures Predict Schistosoma mansoni IgE-Binding Antigens in Human Infection. Front Immunol. 2015 Feb 3;6:26. file

Farmer E, Chase-Topping M, Lawson H, Clutton RE. - Factors affecting the perception of recovery quality in horses after anaesthesia. Equine Vet J. 2014 May;46(3):328-32. file

Fenton A, Streicker DG, Petchey OL, Pedersen AB. - Are All Hosts Created Equal? Partitioning Host Species Contributions to Parasite Persistence in Multihost Communities. Am Nat. 2015 Nov;186(5):610-22. file

Ford CA, Petrova S, Pound JD, Voss JJ, Melville L, Paterson M, Farnworth SL, Gallimore AM, Cuff S, Wheadon H, Dobbin E, Ogden CA, Dumitriu IE, Dunbar DR, Murray PG, Ruckerl D, Allen JE, Hume DA, van Rooijen N, Goodlad JR, Freeman TC, Gregory CD - Oncogenic properties of apoptotic tumor cells in aggressive B cell lymphoma. Curr Biol. 2015 Mar 2;25(5):577-88. file

Froy H, Lewis S, Catry P, Bishop CM, Forster IP, Fukuda A, Higuchi H, Phalan B, Xavier JC, Nussey DH, Phillips RA - Age-related variation in foraging behaviour in the wandering albatross at South georgia: no evidence for senescence. PLoS One. 2015 Jan 9;10(1):e0116415. file

Fukushige M, Mitchell KM, Bourke CD, Woolhouse ME, Mutapi F. - A Meta-Analysis of Experimental Studies of Attenuated Schistosoma mansoni Vaccines in the Mouse Model. Front Immunol. 2015 Feb 27;6:85. file

Garbutt JS, Little TJ, Hoyle A. - Maternal effects on offspring consumption can stabilize fluctuating predator-prey systems. Proc Biol Sci. 2015 Dec 7;282(1820). file

Garnier R, Grenfell BT, Nisbet AJ, Matthews JB, Graham AL - Integrating immune mechanisms to model nematode worm burden: an example in sheep. Parasitology. 2015 Aug 18:1-11. file

Gates MC, Woolhouse ME - Controlling infectious disease through the targeted manipulation of contact network structure. Epidemics. 2015 Sep;12:11-9. file

Gaunt E, Harvala H, Osterback R, Vattipally S, Thomson E, Waris M, Simmonds P. - Genetic characterisation of Coxsackievirus A6 variants associated with atypical hand, foot and mouth disease; a potential role of recombination in emergence and pathogenicity. J Gen Virol.  2015 May;96(Pt 5):1067-79. file

Gentile JE, Rund SS, Madey GR - Modelling sterile insect technique to control the population of Anopheles gambiae. Malar J. 2015 Feb 22;14(1):92. file

Gierlinski M, Cole C, Schofield P, Schurch NJ, Sherstnev A, Singh V, Wrobel N, Gharbi K, Simpson G, Owen-Hughes T, Blaxter M, Barton GJ - Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment. Bioinformatics. 2015 Nov 15;31(22):3625-30. file

Gómez-Arreaza A1, Acosta H1, Quiñones W2, Concepción JL2, Michels PA3, Avilán L4. - Extracellular functions of glycolytic enzymes of parasites: unpredicted use of ancient proteins. Mol Biochem Parasitol. 2014 Feb;193(2):75-81. file

Granroth-Wilding HM, Burthe SJ, Lewis S, Herborn KA, Takahashi EA, Daunt F, Cunningham EJ - Indirect effects of parasitism: costs of infection to other individuals can be greater than direct costs borne by the host. Proc Biol Sci. 2015 Jul 22;282(1811). file

Gray M, Gray D - Regulatory B cells mediate tolerance to apoptotic self in health: implications for disease. Int Immunol. 2015 Nov;27(10):505-11. file

Greischar MA, Reece SE, Mideo N - The role of models in translating within-host dynamics to parasite evolution. Parasitology. 2015 Sep 24:1-10. file

Grierson S, Heaney J, Cheney T, Morgan D, Wyllie S, Powell L, Smith D, Ijaz S, Steinbach F, Choudhury B, Tedder RS. - Prevalence of Hepatitis E Virus Infection in Pigs at the Time of Slaughter, United Kingdom, 2013. Emerg Infect Dis. 2015 Aug;21(8):1396-401. file

Griffiths EC, Pedersen AB, Fenton A, Petchey OL - Reported co-infection deaths are more common in early adulthood and among similar infections. BMC Infect Dis. 2015 Oct 6;15:411. file

Hall M, Woolhouse M, Rambaut A. - Epidemic Reconstruction in a Phylogenetics Framework: Transmission Trees as Partitions of the Node Set. PLoS Comput Biol. 2015 Dec 30;11(12):e1004613. file

Hayward AD, Moorad J, Regan CE, Berenos C, Pilkington JG, Pemberton JM, Nussey DH - Asynchrony of senescence among phenotypic traits in a wild mammal population. Exp Gerontol. 2015 Nov;71:56-68. file

Hewitson JP, Filbey KJ, Esser-von Bieren J, Camberis M, Schwartz C, Murray J, Reynolds LA, Blair N, Robertson E, Harcus Y, Boon L, Huang SC, Yang L, Tu Y, Miller MJ, Voehringer D, Le Gros G, Harris N, Maizels RM - Concerted Activity of IgG1 Antibodies and IL-4/IL-25-Dependent Effector Cells Trap Helminth Larvae in the Tissues following Vaccination with Defined Secreted Antigens, Providing Sterile Immunity to Challenge Infection. PLoS Pathog. 2015 Mar 27;11(3):e1004676. file

Hickey GL, Diggle PJ, McNeilly TN, Tongue SC, Chase-Topping ME, Williams DJ. - The feasibility of testing whether Fasciola hepatica is associated with increased risk of verocytotoxin producing Escherichia coli O157 from an existing study protocol. Prev Vet Med. 2015 May 1;119(3-4):97-104 file

Holmes A, Allison L, Ward M, Dallman TJ, Clark R, Fawkes A, Murphy L, Hanson M - Utility of Whole-Genome Sequencing of Escherichia coli O157 for Outbreak Detection and Epidemiological Surveillance. J Clin Microbiol. 2015 Nov;53(11):3565-73. file

Huffman JE, Albrecht E, Teumer A, Mangino M, Kapur K, Johnson T, Kutalik Z, Pirastu N, Pistis G, Lopez LM, Haller T, Salo P, Goel A, Li M, Tanaka T, Dehghan A, Ruggiero D, Malerba G, Smith AV, Nolte IM, Portas L, Phipps-Green A, Boteva L, Navarro P, Johansson A, Hicks AA, Polasek O, Esko T, Peden JF, Harris SE, Murgia F, Wild SH, Tenesa A, Tin A, Mihailov E, Grotevendt A, Gislason GK, Coresh J, D'Adamo P, Ulivi S, Vollenweider P, Waeber G, Campbell S, Kolcic I, Fisher K, Viigimaa M, Metter JE, Masciullo C, Trabetti E, Bombieri C, Sorice R, Döring A, Reischl E, Strauch K, Hofman A, Uitterlinden AG, Waldenberger M, Wichmann HE, Davies G, Gow AJ, Dalbeth N, Stamp L, Smit JH, Kirin M, Nagaraja R, Nauck M, Schurmann C, Budde K, Farrington SM, Theodoratou E, Jula A, Salomaa V, Sala C, Hengstenberg C, Burnier M, Mägi R, Klopp N, Kloiber S, Schipf S, Ripatti S, Cabras S, Soranzo N, Homuth G, Nutile T, Munroe PB, Hastie N, Campbell H, Rudan I, Cabrera C, Haley C, Franco OH, Merriman TR, Gudnason V, Pirastu M, Penninx BW, Snieder H, Metspalu A, Ciullo M, Pramstaller PP, van Duijn CM, Ferrucci L, Gambaro G, Deary IJ, Dunlop MG, Wilson JF, Gasparini P, Gyllensten U, Spector TD, Wright AF, Hayward C, Watkins H, Perola M, Bochud M, Kao WH, Caulfield M, Toniolo D, Völzke H, Gieger C, Köttgen A, Vitart V. - Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans. PLoS One. 2015 Mar 26;10(3):e0119752. file

Jones LH, Cook PC, Ivens AC, Thomas GD, Phythian-Adams AT, Allen JE, MacDonald AS. - Modulation of dendritic cell alternative activation and function by the vitamin A metabolite retinoic acid. Int Immunol. 2015 Nov;27(11):589-96 file

Kalla R, Ventham NT, Kennedy NA, Quintana JF, Nimmo ER, Buck AH, Satsangi J - MicroRNAs: new players in IBD. Gut. 2015 Mar;64(3):504-513 file

Kapoor A, Kumar A, Simmonds P, Bhuva N, Singh Chauhan L, Lee B, Sall AA, Jin Z, Morse SS, Shaz B, Burbelo PD, Lipkin WI - Virome Analysis of Transfusion Recipients Reveals a Novel Human Virus That Shares Genomic Features with Hepaciviruses and Pegiviruses. MBio. 2015 Sep 22;6(5):e01466-15. file

Kay GL, Millard A, Sergeant MJ, Midzi N, Gwisai R, Mduluza T, Ivens A, Nausch N, Mutapi F, Pallen M - Differences in the Faecal Microbiome in Schistosoma haematobium Infected Children vs. Uninfected Children. PLoS Negl Trop Dis. 2015 Jun 26;9(6):e0003861. file

Koos B, Cane G, Grannas K, Löf L, Arngården L, Heldin J, Clausson CM, Klaesson A, Hirvonen MK, Souza de Oliveira FM, Talibov VO, Pham NT, Auer M, U. Danielson H, Haybaeck J, Kamali-Moghaddam M & Söderberg O - Proximity Dependent Initiation of Hybridization Chain Reaction. Nat Commun. 2015 Jun 12;6:7294. file

Ladner JT, Wiley MR, Mate S, Dudas G, Prieto K, Lovett S, Nagle ER, Beitzel B, Gilbert ML, Fakoli L, Diclaro JW, Schoepp RJ, Fair J, Kuhn JH, Hensley LE, Park DJ, Sabeti PC, Rambaut A, Sanchez-Lockhart M, Bolay FK, Kugelman JR, Palacios G. - Evolution and Spread of Ebola Virus in Liberia, 2014-2015. Cell Host Microbe. 2015 Dec 9;18(6):659-69. file

Larremore DB, Sundararaman SA, Liu W, Proto WR, Clauset A, Loy DE, Speede S, Plenderleith LJ, Sharp PM, Hahn BH, Rayner JC, Buckee CO. - Ape parasite origins of human malaria virulence genes. Nat Commun. 2015 Oct 12;6:8368. file

Mackley EC, Houston S, Marriott CL, Halford EE, Lucas B, Cerovic V, Filbey KJ, Maizels RM, Hepworth MR, Sonnenberg GF, Milling S, Withers DR - CCR7-dependent trafficking of ROR?(+) ILCs creates a unique microenvironment within mucosal draining lymph nodes. Nat Commun. 2015 Jan 9;6:5862. file

MacLeod MK, Anderton SM. - Antigen-based immunotherapy (AIT) for autoimmune and allergic disease. Curr Opin Pharmacol. 2015 Aug;23:11-6. file

Mainda G, Bessell PB, Muma JB, McAteer SP, Chase-Topping ME, Gibbons J, Stevens MP, Gally DL, deC Bronsvoort BM. - Prevalence and patterns of antimicrobial resistance among Escherichia coli isolated from Zambian dairy cattle across different production systems. Sci Rep. 2015 Jul 27;5:12439. file

Matthews KR - 25 years of African trypanosome research: From description to molecular dissection and new drug discovery. Mol Biochem Parasitol. 2015 Mar-Apr;200(1-2):30-40. file

Matthews KR, McCulloch R, Morrison LJ - The within-host dynamics of African trypanosome infections. Philos Trans R Soc Lond B Biol Sci. 2015 Aug 19;370(1675). file

Matthews PC, Sharp CP, Malik A, Gregory WF, Adland E, Jooste P, Goulder PJ, Simmonds P, Klenerman P. - Human Parvovirus 4 Infection among Mothers and Children in South Africa. Emerg Infect Dis. 2015 Apr;21(4):713-715.

Maurice CF, Cl Knowles S, Ladau J, Pollard KS, Fenton A, Pedersen AB, Turnbaugh PJ. - Marked seasonal variation in the wild mouse gut microbiota. ISME J. 2015 Nov;9(11):2423-34. file

Mbisa JL, Fearnhill E, Dunn DT, Pillay D, Asboe D, Cane PA; UK HIV Drug Resistance Database. - Evidence of self-sustaining drug resistant HIV-1 lineages among untreated patients in the UK. Clin Infect Dis. 2015 Sep 1;61(5):829-36 file

Métras R, Jewell C, Porphyre T, Thompson PN, Pfeiffer DU, Collins LM, White RG - Risk factors associated with Rift Valley fever epidemics in South Africa in 2008-11. Sci Rep. 2015 Mar 25;5:9492. file

McArthur CL, Handel IG, Robinson A, Hodgkinson JE, Bronsvoort BM, Burden F, Kaplan RM, Matthews JB - Development of the larval migration inhibition test for comparative analysis of ivermectin sensitivity in cyathostomin populations. VVet Parasitol. 2015 Sep 15;212(3-4):292-8. file

McCaskill J, Praihirunkit P, Sharp PM, Buck AH. - RNA-mediated degradation of microRNAs: A widespread viral strategy? RNA Biol. 2015 Apr 7:0. file

McClean D, McNally L, Salzberg LI, Devine KM, Brown SP, Donohue I. - Single gene locus changes perturb complex microbial communities as much as apex predator loss. Nat Commun. 2015 Sep 10;6:8235. file

McNally L, Brown SP - Building the microbiome in health and disease: niche construction and social conflict in bacteria. Philos Trans R Soc Lond B Biol Sci. 2015 Aug 19;370(1675). file

McPherson RC, Turner DG, Mair I, O'Connor RA, Anderton SM - T-bet Expression by Foxp3(+) T Regulatory Cells is Not Essential for Their Suppressive Function in CNS Autoimmune Disease or Colitis. Front Immunol. 2015 Feb 18;6:69. file

McTaggart SJ, Cézard T, Garbutt JS, Wilson PJ, Little TJ - Transcriptome profiling during a natural host-parasite interaction. BMC Genomics. 2015 Aug 28;16:643. file

McSorley HJ, Blair NF, Robertson E, Maizels RM - Suppression of OVA-alum induced allergy by Heligmosomoides polygyrus products is MyD88-, TRIF-, regulatory T- and B cell-independent, but is associated with reduced innate lymphoid cell activation. Exp Parasitol. 2015 Nov;158:8-17. file

McSorley HJ, Blair N, Smith KA, McKenzie ANJ and Maizels RM - Blockade of IL-33-dependent airway allergic responses by secreted products from a helminth parasite. Mucosal Immunology 2014 Sep;7(5):1068-78. file

Meinke P, Schneiderat P, Srsen V, Korfali N, Lê Thành P, Cowan GJ, Cavanagh DR, Wehnert M, Schirmer EC, Walter MC. - Abnormal proliferation and spontaneous differentiation of myoblasts from a symptomatic female carrier of X-linked Emery-Dreifuss muscular dystrophy. Neuromuscul Disord. 2015 Feb;25(2):127-36. file

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